Tag sequencing using high-throughput sequencing technologies are now regularly used to identify specific sequence features such as transcription factor binding sites (ChIP-seq) or regions of open chromatin (DNase-seq). F-Seq was developed to intuitively summarize and display individual sequence data as an accurate and interpretable signal. The software package generates a continuous tag sequence density estimation, allowing identification of biologically meaningful sites whose output can be displayed directly in the UCSC Genome Browser.
Contact: Terry Furey, tsfurey@email.unc.edu